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Package org.broad.igv.util

Inner Packages
org.broad.igv.util.blat
org.broad.igv.util.collections
org.broad.igv.util.converters
org.broad.igv.util.encode
org.broad.igv.util.extview
org.broad.igv.util.ftp
org.broad.igv.util.index
org.broad.igv.util.stats
org.broad.igv.util.stream
org.broad.igv.util
AlphaColorGradient
AmazonS3URI
A URI wrapper that can parse o ut information about an S3 UR I.
AmazonUtils
ArrayHeapIntSorter
ArrayHeapObjectSorter
AsciiEcho
BrowserLauncher
ByteConverter
ChromosomeColors
CompressionUtils
Created by IntelliJ IDEA. User : jrobinso, mdecautis Date: D ec 13, 2009 Time: 4:16:42...
DumpHttpHeaders
Utility class to dump headers from an http response. Used t o debug JWS update proble...
FeatureCache
FeatureCache;:TT
FileUtils
Abstract
Filter
Abstract
FilterElement
FilterElement$BooleanOperator
FilterElement$Operator
HeadObjectRequest
HeadObjectResponse
HttpUtils
Wrapper utility class... for i nteracting with HttpURLConnec tion.
IlluminaUtils
Interface
IntComparator
Interval
Interface
Comparable
IntervalTree
An implementation of an interv al tree, following the explan ation. from CLR.
JWTParser
Utility class for all operatio ns on JWT.
JavaAgent
Do not add any more dependenci es to this class than necessa ry. Packaged into JavaAge...
ListBucketsRequest
ListBucketsResponse
ListObjectsV2Request
ListObjectsV2Response
LittleEndianInputStream
LittleEndianInputStream
UI
LoginDialog
UI
JDialog
LongRunningTask
Utility class for executing lo ng running tasks in their own thread (i.e. not on the ...
Interface
Callable
MD5Checksum
MacroSnapshotAction
Interface
NamedRunnable
User: jrobinso Date: Feb 1, 20 10
Interface
Runnable
ObjectCache
ObservableForObject
Contains an object of some typ e, and provides an accessor a nd a way of notifying obs...
Observable
OneKGUtils
Created by jrobinso on 8/28/14 . 1-off utilties for manipula ting 1000 genomes project...
Pair
ParsingUtils
ResourceLocator
Represents a data file or othe r resource, which might be lo cal file or remote resour...
Enum
RunnableResult
Enum for indicating how a long running computation complete d.
RuntimeUtils
S3Presigner
SOLIDUtils
User: jrobinso Date: Feb 21, 2 010
SequenceGC
StringUtils
Created by IntelliJ IDEA. User : jrobinso Date: Oct 30, 2009 Time: 1:51:36 AM To chan...
TutorialUtils
Utilities for creating compact files for tutorials
UCSCBinUtils
Created by jrobinso on 8/29/17 .
URLDownloader
Runnable for downloading a fil e from a URL. Downloading is buffered, and can be canc...
URLUtils
UnzipGenomes
UI
UserPasswordDialog
UserPasswordInputImpl
Interface
UserPasswordInput
Utilities
ZipArchiveWrapper