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Package org.broad.igv.goby

class GobyAlignment
A Facade to a Goby alignment e ntry. The facade exposes Goby alignment entries in the...
class GobyAlignmentIterator
An iterator over Goby alignmen t entries. IGV iterator retur n entries that fall withi...
class GobyAlignmentQueryReader
Query reader to parse Goby ali gnment files. The compact ali gnment files must be sort...
class GobyCountArchiveDataSource
A data source for Goby compres sed base-level histograms (.c ounts files).
Interface
interface CoverageDataSource
Interface
interface AlignmentReader
Interface
interface CloseableIterator
Interface
interface Alignment
iteratorEMPTY_ITERATOR